PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YPV42
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 236aa    MW: 25771.3 Da    PI: 8.6969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YPV42genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-1179126454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  Aradu.YPV42  79 SKACREKLRRDRLNDKFVELGSILEPG---RPPKTDKAAILIDAVRMVTQL 126
                  5678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.75475126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.50E-778131No hitNo description
SuperFamilySSF474595.63E-1378145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-979126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-1279148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-881132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MASRESTNWL FDYALIDDIP VHDATFAAPS SGFNWPSNAI NGSSNVGVEI DGSLGDSDGI  60
KESGSKKRGR SESCAPSSSK ACREKLRRDR LNDKFVELGS ILEPGRPPKT DKAAILIDAV  120
RMVTQLRGEA QKLKDSNMGL QEKIKELKSE KNELRDEKQR LKAEKEKLEQ QLKSMSAQPS  180
FMAPPTAIPA AFAPQGQVPG NKLVPIISYP GVAMWQFMPP AAVDTSQDHV LRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953562.11e-174PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-113ILR3_ARATH; Transcription factor ILR3
TrEMBLI3T8I31e-141I3T8I3_LOTJA; Uncharacterized protein
STRINGGLYMA06G41620.11e-139(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-95bHLH family protein